C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor II H, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107644 Gtf2h1-002 ENSMUSG00000006599 10090 + 7:46796671-46823275 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartOvaryPlacentaTestisENSMUST00000107644
Transcript ID Brain Breast Heart Ovary Placenta Testis
ENSMUST00000107644 7.820±0.00 1.315±0.00 0.532±0.00 4.774±2.32 22.019±6.59 25.842±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041D CIL_00041D_0003 CGP 7:46760466-46823800
CIL_000445 CIL_000445_0002 CGP 7:46796103-46855627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000439 IEA core TFIIH complex
GO:0005634 IDA nucleus
GO:0006289 IEA nucleotide-excision repair
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265963 GTF2H1-001 protein_coding Homo_sapiens 0 2429
ENST00000418116 GTF2H1-017 retained_intron Homo_sapiens 0 2178
ENST00000453096 GTF2H1-002 protein_coding Homo_sapiens 0 2427
ENST00000524753 GTF2H1-014 protein_coding Homo_sapiens 0 798
ENST00000525831 GTF2H1-006 protein_coding Homo_sapiens 0 414
ENST00000526282 GTF2H1-013 retained_intron Homo_sapiens 0 477
ENST00000526461 GTF2H1-007 retained_intron Homo_sapiens 0 246
ENST00000526630 GTF2H1-011 protein_coding Homo_sapiens 0 846
ENST00000528427 GTF2H1-012 retained_intron Homo_sapiens 0 315
ENST00000530496 GTF2H1-010 protein_coding Homo_sapiens 0 1258
ENST00000531757 GTF2H1-004 processed_transcript Homo_sapiens 0 451
ENST00000532227 GTF2H1-008 retained_intron Homo_sapiens 0 246
ENST00000534641 GTF2H1-003 protein_coding Homo_sapiens 0 1929
ENST00000543932 GTF2H1-018 retained_intron Homo_sapiens 0 1175
ENST00000585803 RP11-795H16.2-001 processed_pseudogene Homo_sapiens 0 1786
ENST00000607664 GTF2H1-019 retained_intron Homo_sapiens 3e-21 106

Loading