C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | solute carrier family 44, member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000107645  |
Slc44a1-004 |
ENSMUSG00000028412 |
10090 | + |
4:53535612-53621798  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00022C | CIL_00022C_0003 | CGP | 4:53030787-53622478 |
| CIL_00033S | CIL_00033S_0002 | CGP | 4:53440413-53707009 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0015220 | IDA | choline transmembrane transporter activity |
| GO:0015871 | IDA | choline transport |
| GO:0016021 | IDA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000374720
|
SLC44A1-003 | protein_coding | Homo_sapiens | 0 | 2006 |
|
ENST00000374723
|
SLC44A1-001 | protein_coding | Homo_sapiens | 0 | 2006 |
|
ENST00000374724
|
SLC44A1-004 | protein_coding | Homo_sapiens | 0 | 2098 |
|
ENST00000470972
|
SLC44A1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 2006 |
|
ENST00000607701
|
SLC44A1-005 | retained_intron | Homo_sapiens | 0 | 579 |
