C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage gated channel, Shaw-related subfamily, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107906 Kcnc3-002 ENSMUSG00000062785 10090 + 7:44590886-44604754 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107906
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107906 0.899±0.72 0.364±0.15 0.117±0.03 10.686±4.19 0.232±0.11 0.381±0.17 0.253±0.04 6.028±0.43 0.504±0.39 11.114±0.88 0.595±0.33 0.236±0.08 0.189±0.15 0.494±0.46

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0008076 IEA voltage-gated potassium channel complex
GO:0030673 IDA axolemma
GO:0031594 IDA neuromuscular junction
GO:0032590 IDA dendrite membrane
GO:0032809 IDA neuronal cell body membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043679 IDA axon terminus
GO:0046928 IMP regulation of neurotransmitter secretion
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265969 KCNC1-002 protein_coding Homo_sapiens 0 682
ENST00000298972 KCNC2-201 protein_coding Homo_sapiens 0 302
ENST00000350228 KCNC2-004 protein_coding Homo_sapiens 0 302
ENST00000369787 KCNC4-004 protein_coding Homo_sapiens 0 641
ENST00000376959 KCNC3-002 protein_coding Homo_sapiens 0 2590
ENST00000379472 KCNC1-001 protein_coding Homo_sapiens 0 682
ENST00000393288 KCNC2-002 protein_coding Homo_sapiens 0 302
ENST00000413138 KCNC4-006 protein_coding Homo_sapiens 0 641
ENST00000438661 KCNC4-003 protein_coding Homo_sapiens 0 641
ENST00000459877 KCNC4-002 retained_intron Homo_sapiens 0 593
ENST00000469655 KCNC4-001 nonsense_mediated_decay Homo_sapiens 0 641
ENST00000474951 KCNC3-004 protein_coding Homo_sapiens 0 645
ENST00000477616 KCNC3-005 protein_coding Homo_sapiens 0 2590
ENST00000489935 KCNC4-005 retained_intron Homo_sapiens 0 641
ENST00000540018 KCNC2-003 protein_coding Homo_sapiens 0 302
ENST00000548513 KCNC2-006 protein_coding Homo_sapiens 0 302
ENST00000549446 KCNC2-001 protein_coding Homo_sapiens 0 302
ENST00000550433 KCNC2-005 protein_coding Homo_sapiens 0 302

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