C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108060 Ubap1-002 ENSMUSG00000028437 10090 + 4:41348996-41389766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108060
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108060 3.610±0.53 10.579±2.54 10.468±5.68 4.691±1.48 5.605±0.39 5.759±1.53 6.886±0.80 6.640±3.28 2.728±0.30 6.028±1.45 8.202±3.07 14.153±3.68 7.323±1.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004U CIL_00004U_0002 CGP 4:41291300-41390525
CIL_0005IT CIL_0005IT_0002 CGP 4:41348996-41464887

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000813 ISS ESCRT I complex
GO:0005829 ISS cytosol
GO:0015031 IEA protein transport
GO:0043130 ISS ubiquitin binding
GO:0043162 ISS ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297661 UBAP1-001 protein_coding Homo_sapiens 0 1687
ENST00000359544 UBAP1-002 protein_coding Homo_sapiens 0 1463
ENST00000379166 KIF24-201 protein_coding Homo_sapiens 6.00036e-42 178
ENST00000379174 KIF24-003 protein_coding Homo_sapiens 6.00036e-42 178
ENST00000379186 UBAP1-003 protein_coding Homo_sapiens 0 2490
ENST00000402558 KIF24-002 protein_coding Homo_sapiens 6.00036e-42 178

Loading