C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005IT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165006-ENSG00000186638 CGP 9606 9:34179013-34329200
GeneTranscriptPositionBiotype
ENSG00000165006 (UBAP1)
ubiquitin associated protein 1 		ENST00000297661 (UBAP1-001) 34179013-34252523 protein_coding
ENST00000359544 (UBAP1-002) 34220439-34252522 protein_coding
ENST00000379186 (UBAP1-003) 34179038-34252520 protein_coding
ENSG00000186638 (KIF24)
kinesin family member 24 		ENST00000379166 (KIF24-201) 34252381-34329200 protein_coding
ENST00000379174 (KIF24-003) 34252381-34311371 protein_coding
ENST00000402558 (KIF24-002) 34252381-34311371 protein_coding
ENSG00000227383 (RP11-571F15.2)
 ENST00000439099 (RP11-571F15.2-001) 34191555-34191881 processed_pseudogene
ENSG00000229207 (SERPINH1P1)
serpin peptidase inhibitor, clade H1, pseudogene 1 		ENST00000419794 (SERPINH1P1-001) 34318407-34319655 processed_pseudogene
ENSG00000233668 (RP11-571F15.3)
 ENST00000372214 (RP11-571F15.3-001) 34223984-34224628 processed_pseudogene
ENSG00000252164 (RNA5SP282)
RNA, 5S ribosomal pseudogene 282 		ENST00000516355 (RNA5SP282-201) 34206134-34206241 rRNA
ENSG00000279336 (AL353662.2)
 ENST00000625131 (AL353662.2-201) 34201273-34201515 pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005IT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028437-ENSMUSG00000028438 CGP 10090 4:41348996-41464887
GeneTranscriptPositionBiotype
ENSMUSG00000028437 (Ubap1)
ubiquitin-associated protein 1 		ENSMUST00000072866 (Ubap1-001) 41348996-41390525 protein_coding
ENSMUST00000108060 (Ubap1-002) 41348996-41389766 protein_coding
ENSMUST00000132235 (Ubap1-004) 41371725-41388692 protein_coding
ENSMUST00000136705 (Ubap1-005) 41349048-41371285 processed_transcript
ENSMUST00000154529 (Ubap1-003) 41371248-41379416 processed_transcript
ENSMUSG00000028438 (Kif24)
kinesin family member 24 		ENSMUST00000030148 (Kif24-002) 41391611-41464848 protein_coding
ENSMUST00000108055 (Kif24-001) 41390745-41464840 protein_coding
ENSMUST00000127376 (Kif24-008) 41403301-41404786 processed_transcript
ENSMUST00000131532 (Kif24-004) 41454390-41464887 processed_transcript
ENSMUST00000133497 (Kif24-005) 41447324-41464846 processed_transcript
ENSMUST00000141951 (Kif24-007) 41395185-41409778 processed_transcript
ENSMUST00000154175 (Kif24-003) 41413548-41464840 processed_transcript
ENSMUST00000154535 (Kif24-006) 41428534-41464846 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IT_0001ENSG00000165006ENST00000297661ENST00000359544ENST00000379186ENSG00000186638ENST00000379166ENST00000379174ENST00000402558ENSG00000227383ENST00000439099ENSG00000229207ENST00000419794ENSG00000233668ENST00000372214ENSG00000252164ENST00000516355ENSG00000279336ENST00000625131CIL_0005IT_0002ENSMUSG00000028437ENSMUST00000072866ENSMUST00000108060ENSMUST00000132235ENSMUST00000136705ENSMUST00000154529ENSMUSG00000028438ENSMUST00000030148ENSMUST00000108055ENSMUST00000127376ENSMUST00000131532ENSMUST00000133497ENSMUST00000141951ENSMUST00000154175ENSMUST00000154535
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IT_0001ENSG00000165006ENST00000297661ENST00000359544ENST00000379186ENSG00000186638ENST00000379166ENST00000402558ENSG00000227383ENST00000439099ENSG00000229207ENST00000419794ENSG00000233668ENST00000372214ENSG00000252164ENST00000516355ENSG00000279336ENST00000625131CIL_0005IT_0002ENSMUSG00000028437ENSMUST00000072866ENSMUST00000108060ENSMUST00000132235ENSMUST00000136705ENSMUSG00000028438ENSMUST00000030148ENSMUST00000108055ENSMUST00000127376ENSMUST00000131532ENSMUST00000141951ENSMUST00000154175
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165006 ENST00000297661 9.992±0.00 8.646±0.00 2.925±0.00 5.730±4.38 8.043±0.00 8.464±6.30 8.885±8.05 15.779±0.00 3.952±0.96 21.400±19.20 14.418±9.92 16.203±8.14 17.082±2.53 26.311±7.65
ENST00000359544 N/A 6.408±0.00 N/A 0.944±0.00 2.626±0.00 4.615±0.00 N/A 5.331±0.76 3.728±2.82 N/A 10.388±0.00 7.361±0.00 5.231±0.00 N/A
ENST00000379186 N/A N/A N/A 4.226±0.00 1.771±0.00 1.591±0.00 0.716±0.00 N/A N/A 0.618±0.00 N/A 1.619±0.00 N/A N/A
ENSG00000186638 ENST00000379166 N/A N/A N/A N/A N/A 0.651±0.00 N/A N/A N/A N/A N/A 1.062±0.00 N/A 4.053±0.53
ENST00000379174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402558 N/A N/A N/A N/A 0.904±0.00 N/A N/A N/A N/A 0.499±0.00 N/A 2.710±0.00 N/A 13.164±0.00
ENSG00000227383 ENST00000439099 N/A 0.247±0.00 N/A 0.205±0.00 1.554±1.31 N/A 0.092±0.02 N/A 0.243±0.00 0.784±0.75 0.070±0.00 0.289±0.17 0.080±0.00 0.160±0.00
ENSG00000229207 ENST00000419794 0.211±0.00 0.148±0.00 N/A 0.049±0.00 0.118±0.00 0.299±0.00 0.019±0.00 0.068±0.00 N/A 0.287±0.00 0.018±0.00 0.103±0.03 N/A 0.165±0.01
ENSG00000233668 ENST00000372214 0.147±0.00 0.418±0.00 N/A 0.055±0.00 0.026±0.00 0.295±0.00 0.073±0.00 0.125±0.06 N/A 0.441±0.00 0.234±0.00 0.094±0.04 N/A 0.082±0.01
ENSG00000252164 ENST00000516355 N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279336 ENST00000625131 0.568±0.00 0.702±0.00 N/A 0.157±0.00 0.355±0.00 1.242±0.66 0.195±0.00 0.888±0.00 N/A 0.059±0.00 0.659±0.00 1.111±0.00 N/A 0.230±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028437 ENSMUST00000072866 17.486±1.27 16.089±1.26 2.799±0.00 1.870±0.17 13.502±4.72 13.930±5.87 4.782±1.25 15.926±1.05 9.427±2.96 10.237±3.83 5.056±0.98 13.841±6.28 6.975±3.06 17.774±8.61
ENSMUST00000108060 3.610±0.53 N/A 10.579±2.54 10.468±5.68 4.691±1.48 5.605±0.39 5.759±1.53 6.886±0.80 6.640±3.28 2.728±0.30 6.028±1.45 8.202±3.07 14.153±3.68 7.323±1.94
ENSMUST00000132235 N/A N/A N/A 24.462±0.00 N/A N/A N/A N/A N/A N/A N/A 27.428±0.00 54.625±16.73 32.445±0.00
ENSMUST00000136705 N/A 34.261±7.93 N/A N/A N/A N/A N/A N/A 25.526±4.48 N/A N/A N/A N/A N/A
ENSMUST00000154529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028438 ENSMUST00000030148 N/A N/A N/A 0.062±0.00 N/A 0.183±0.01 N/A N/A 0.074±0.02 0.302±0.00 0.037±0.00 0.306±0.08 N/A N/A
ENSMUST00000108055 0.429±0.18 N/A 0.177±0.00 0.641±0.39 0.234±0.03 0.595±0.00 0.071±0.02 0.218±0.07 1.223±1.35 0.248±0.14 0.040±0.02 0.606±0.20 0.685±0.39 4.141±1.43
ENSMUST00000127376 N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131532 1.066±0.35 1.116±0.34 0.794±0.04 1.224±0.75 1.410±0.49 1.470±0.42 0.900±0.19 1.902±0.15 1.543±0.53 1.845±0.32 0.237±0.07 1.960±0.69 13.801±6.61 N/A
ENSMUST00000133497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.858±0.00
ENSMUST00000154175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A
ENSMUST00000154535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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