C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: clathrin interactor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109261 Clint1-001 ENSMUSG00000006169 10090 + 11:45852051-45910625 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109261
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109261 8.049±3.16 8.655±2.11 10.097±0.00 8.330±0.42 8.282±0.68 16.463±2.02 7.588±1.15 8.275±3.21 7.666±2.26 9.109±1.22 2.974±0.96 14.920±2.24 11.452±1.47 9.054±1.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AQ CIL_0005AQ_0002 CGP 11:44617317-45910625
CIL_0007N2 CIL_0007N2_0002 UCNEbase 11:44634884-45922375
CIL_00053M CIL_00053M_0002 CGP 11:45852051-45944935

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000411809 CLINT1-001 protein_coding Homo_sapiens 0 1832
ENST00000518855 CLINT1-004 retained_intron Homo_sapiens 0 1434
ENST00000521047 CLINT1-007 nonsense_mediated_decay Homo_sapiens 0 760
ENST00000521615 CLINT1-006 protein_coding Homo_sapiens 0 283
ENST00000522381 CLINT1-008 protein_coding Homo_sapiens 0 501
ENST00000523094 CLINT1-003 protein_coding Homo_sapiens 0 3192
ENST00000523908 CLINT1-002 protein_coding Homo_sapiens 0 2628
ENST00000524306 CLINT1-005 retained_intron Homo_sapiens 0 1498
ENST00000530302 CLINT1-009 retained_intron Homo_sapiens 0 721
ENST00000530742 CLINT1-010 protein_coding Homo_sapiens 0 3190

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