C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: clathrin interactor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006169 Clint1 10090 + 11:45852051-45910625 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109260 Clint1-002 45852051-45910625 protein_coding
  ENSMUST00000109261 Clint1-001 45852051-45910625 protein_coding
  ENSMUST00000133715 Clint1-003 45882397-45910625 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109260ENSMUST00000109261ENSMUST00000133715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109260 22.977±5.79 22.760±7.16 26.261±2.06 14.512±2.09 20.681±2.31 50.165±3.40 9.245±3.53 27.782±2.18 24.443±10.79 23.076±3.41 8.047±0.76 34.944±8.34 43.763±11.48 16.113±5.32
ENSMUST00000109261 8.049±3.16 8.655±2.11 10.097±0.00 8.330±0.42 8.282±0.68 16.463±2.02 7.588±1.15 8.275±3.21 7.666±2.26 9.109±1.22 2.974±0.96 14.920±2.24 11.452±1.47 9.054±1.76
ENSMUST00000133715 N/A N/A N/A 1.341±0.02 1.912±0.08 N/A N/A N/A 2.644±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AQ CIL_0005AQ_0002 CGP 11:44617317-45910625
CIL_0007N2 CIL_0007N2_0002 UCNEbase 11:44634884-45922375
CIL_00053M CIL_00053M_0002 CGP 11:45852051-45944935

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0016020 IEA membrane
GO:0030136 IEA clathrin-coated vesicle
GO:0030276 IEA clathrin binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0048268 IEA clathrin coat assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025535 clint1a clathrin interactor 1a protein_coding Danio_rerio
ENSDARG00000089914 CLINT1 (2 of 2) clathrin interactor 1 protein_coding Danio_rerio
ENSG00000113282 CLINT1 clathrin interactor 1 protein_coding Homo_sapiens

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