C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tocopherol (alpha) transfer protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109408 Ttpal-002 ENSMUSG00000017679 10090 + 2:163602322-163616500 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000109408
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000109408 2.037±0.36 7.692±1.31 2.661±0.00 7.935±2.89 4.420±0.52 1.602±0.03 1.343±0.09 1.219±0.35 4.383±1.48 6.052±1.92 3.850±1.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R9 CIL_0007R9_0002 VISTA 2:163385776-163987192
CIL_0002B3 CIL_0002B3_0002 CGP 2:163506808-163619013
CIL_0002SO CIL_0002SO_0002 CGP 2:163602314-163645131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005215 IEA transporter activity
GO:0005622 IEA intracellular
GO:0006810 IEA transport
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262605 TTPAL-002 protein_coding Homo_sapiens 0 1317
ENST00000372904 TTPAL-001 protein_coding Homo_sapiens 0 1225
ENST00000372906 TTPAL-005 protein_coding Homo_sapiens 0 520
ENST00000456317 TTPAL-004 protein_coding Homo_sapiens 0 689

Loading