C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tocopherol (alpha) transfer protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262605 TTPAL-002 ENSG00000124120 9606 + 20:44475886-44494603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000262605
Transcript ID Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000262605 0.488±0.00 0.521±0.00 0.414±0.37 0.976±0.00 3.806±0.00 0.539±0.00 1.709±0.43 0.524±0.03 1.296±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R9 CIL_0007R9_0001 VISTA 20:44272530-44874028
CIL_0002SO CIL_0002SO_0001 CGP 20:44475886-44522109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005622 IEA intracellular
GO:0006810 IEA transport
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171696 Ttpal-201 protein_coding Mus_musculus 0 1319
ENSMUST00000109408 Ttpal-002 protein_coding Mus_musculus 0 1317
ENSMUST00000144729 Ttpal-003 retained_intron Mus_musculus 0 824
ENSMUST00000156839 Ttpal-004 protein_coding Mus_musculus 0 667
ENSMUST00000109405 Ttpal-001 nonsense_mediated_decay Mus_musculus 0 556
ENSMUST00000132904 Ttpal-006 retained_intron Mus_musculus 0 488
ENSMUST00000152135 Ttpal-005 protein_coding Mus_musculus 3e-25 122

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