C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB1, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109601 Rab1-002 ENSMUSG00000020149 10090 + 11:20201439-20225464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000109601
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000109601 44.777±1.77 52.970±6.92 33.420±12.73 38.163±17.89 87.941±31.54 7.188±1.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ON CIL_0004ON_0002 CGP 11:20201432-20249429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005794 IDA Golgi apparatus
GO:0006886 TAS intracellular protein transport
GO:0006888 ISA ER to Golgi vesicle-mediated transport
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398529 RAB1A-004 protein_coding Homo_sapiens 0 1866
ENST00000401856 RP1-263J7.2-001 processed_pseudogene Homo_sapiens 0 202
ENST00000409751 RAB1A-003 protein_coding Homo_sapiens 0 1356
ENST00000409784 RAB1A-001 protein_coding Homo_sapiens 0 1356
ENST00000409892 RAB1A-002 protein_coding Homo_sapiens 0 1356
ENST00000494188 RAB1A-005 processed_transcript Homo_sapiens 0 355

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