C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB1A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409751 RAB1A-003 ENSG00000138069 9606 - 2:65087871-65130104 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409751
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409751 33.000±0.00 35.752±0.00 37.871±0.00 40.568±0.00 37.127±0.00 27.048±0.00 75.634±0.00 35.793±0.00 27.878±0.00 10.803±0.00 61.132±34.00 54.580±18.64 51.165±3.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163483 Rab1-201 protein_coding Mus_musculus 0 1735
ENSMUST00000020358 Rab1-001 protein_coding Mus_musculus 0 1735
ENSMUST00000109602 Rab1-003 protein_coding Mus_musculus 0 1561
ENSMUST00000109601 Rab1-002 protein_coding Mus_musculus 0 1356
ENSMUST00000132285 Rab1-004 processed_transcript Mus_musculus 0 370
ENSMUST00000152728 Rab1-005 processed_transcript Mus_musculus 0 195

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