C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: von Willebrand factor C domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109681 Vwc2-001 ENSMUSG00000050830 10090 + 11:11114223-11263526 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000109681
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000109681 0.092±0.02 0.229±0.10 0.242±0.06 0.034±0.01 0.094±0.00 0.054±0.02 0.027±0.01 0.010±0.00 0.029±0.00 0.014±0.00 0.110±0.07 0.049±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S3 CIL_0000S3_0002 CGP 11:9191942-11268931
CIL_0006LI CIL_0006LI_0002 CGP 11:11114223-11462408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005604 IDA basement membrane
GO:0005614 IDA interstitial matrix
GO:0005615 IDA extracellular space
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030054 IEA cell junction
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0031012 IDA extracellular matrix
GO:0032281 IDA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045202 IEA synapse
GO:0045666 IDA positive regulation of neuron differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340652 VWC2-001 protein_coding Homo_sapiens 0 1681

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