C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000S3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179869-ENSG00000188730 CGP 9606 7:48171458-49921950
GeneTranscriptPositionBiotype
ENSG00000042813 (ZPBP)
zona pellucida binding protein 		ENST00000046087 (ZPBP-001) 49937441-50093264 protein_coding
ENST00000413331 (ZPBP-004) 50081860-50093232 nonsense_mediated_decay
ENST00000419417 (ZPBP-003) 49937528-50093236 protein_coding
ENST00000450231 (ZPBP-006) 50081774-50121329 protein_coding
ENST00000465922 (ZPBP-002) 49850478-49936161 processed_transcript
ENST00000491129 (ZPBP-005) 49850421-50056424 processed_transcript
ENSG00000179869 (ABCA13)
ATP-binding cassette, sub-family A (ABC1), member 13 		ENST00000411975 (ABCA13-003) 48455063-48647496 protein_coding
ENST00000417403 (ABCA13-002) 48171458-48272995 nonsense_mediated_decay
ENST00000435451 (ABCA13-005) 48507872-48520145 protein_coding
ENST00000435803 (ABCA13-001) 48171460-48647495 protein_coding
ENST00000453246 (ABCA13-004) 48376442-48644718 nonsense_mediated_decay
ENST00000484268 (ABCA13-006) 48313067-48404665 retained_intron
ENST00000544596 (ABCA13-008) 48279276-48646283 protein_coding
ENST00000611776 (ABCA13-007) 48279276-48627092 processed_transcript
ENSG00000188730 (VWC2)
von Willebrand factor C domain containing 2 		ENST00000340652 (VWC2-001) 49773661-49921950 protein_coding
ENSG00000218305 (AC006024.4)
cell division cycle 14C 		ENST00000428251 (AC006024.4-001) 48919765-48926013 processed_pseudogene
ENSG00000225705 (AC004899.3)
 ENST00000424687 (AC004899.3-001) 48846426-48852898 processed_pseudogene
ENSG00000228173 (AC091770.3)
 ENST00000456513 (AC091770.3-001) 48660575-48663305 lincRNA
ENSG00000229165 (GDI2P1)
GDP dissociation inhibitor 2 pseudogene 1 		ENST00000429312 (GDI2P1-001) 48902556-48903891 processed_pseudogene
ENSG00000234686 (AC010971.1)
 ENST00000440455 (AC010971.1-001) 49230137-49254816 lincRNA
ENSG00000279104 (RP11-138B9.1)
 ENST00000624154 (RP11-138B9.1-001) 49760897-49762764 TEC
ENSG00000279578 (RP4-815D20.1)
 ENST00000622993 (RP4-815D20.1-001) 48847766-48851625 TEC
CIL_0000S3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004668-ENSMUSG00000050830 CGP 10090 11:9191942-11268931
GeneTranscriptPositionBiotype
ENSMUSG00000004668 (Abca13)
ATP-binding cassette, sub-family A (ABC1), member 13 		ENSMUST00000042740 (Abca13-001) 9191942-9684259 protein_coding
ENSMUST00000141233 (Abca13-002) 9191942-9224540 processed_transcript
ENSMUST00000151522 (Abca13-003) 9193451-9256178 protein_coding
ENSMUSG00000050830 (Vwc2)
von Willebrand factor C domain containing 2 		ENSMUST00000056344 (Vwc2-201) 11115851-11266638 protein_coding
ENSMUST00000109681 (Vwc2-001) 11114223-11263526 protein_coding
ENSMUST00000129670 (Vwc2-002) 11114744-11268931 nonsense_mediated_decay
ENSMUST00000154155 (Vwc2-003) 11116485-11131183 processed_transcript
ENSMUSG00000081629 (Eif3s6-ps1)
eukaryotic translation initiation factor 3, subunit 6, pseudogene 1 		ENSMUST00000117907 (Eif3s6-ps1-001) 9737152-9737621 processed_pseudogene
ENSMUSG00000082312 (Gm11996)
predicted gene 11996 		ENSMUST00000117538 (Gm11996-001) 10239337-10240251 processed_pseudogene
ENSMUSG00000084091 (Gm11995)
predicted gene 11995 		ENSMUST00000121099 (Gm11995-001) 10199545-10199772 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000S3_0001ENSG00000042813ENST00000046087ENST00000413331ENST00000419417ENST00000450231ENST00000465922ENST00000491129ENSG00000179869ENST00000411975ENST00000417403ENST00000435451ENST00000435803ENST00000453246ENST00000484268ENST00000544596ENST00000611776ENSG00000188730ENST00000340652ENSG00000218305ENST00000428251ENSG00000225705ENST00000424687ENSG00000228173ENST00000456513ENSG00000229165ENST00000429312ENSG00000234686ENST00000440455ENSG00000279104ENST00000624154ENSG00000279578ENST00000622993CIL_0000S3_0002ENSMUSG00000004668ENSMUST00000042740ENSMUST00000141233ENSMUST00000151522ENSMUSG00000050830ENSMUST00000056344ENSMUST00000109681ENSMUST00000129670ENSMUST00000154155ENSMUSG00000081629ENSMUST00000117907ENSMUSG00000082312ENSMUST00000117538ENSMUSG00000084091ENSMUST00000121099
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000S3_0001ENSG00000042813ENST00000046087ENST00000413331ENST00000419417ENST00000465922ENSG00000179869ENST00000411975ENST00000417403ENST00000435803ENST00000453246ENST00000484268ENST00000544596ENST00000611776ENSG00000188730ENST00000340652ENSG00000218305ENST00000428251ENSG00000225705ENST00000424687ENSG00000228173ENST00000456513ENSG00000229165ENST00000429312ENSG00000234686ENST00000440455ENSG00000279104ENST00000624154ENSG00000279578ENST00000622993CIL_0000S3_0002ENSMUSG00000004668ENSMUST00000042740ENSMUST00000141233ENSMUST00000151522ENSMUSG00000050830ENSMUST00000056344ENSMUST00000109681ENSMUST00000129670ENSMUST00000154155ENSMUSG00000081629ENSMUST00000117907ENSMUSG00000082312ENSMUST00000117538ENSMUSG00000084091ENSMUST00000121099
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000042813 ENST00000046087 N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A 25.279±3.98
ENST00000413331 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A
ENST00000419417 0.056±0.00 0.177±0.00 N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A 0.059±0.00 N/A 32.469±14.71
ENST00000450231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465922 N/A N/A N/A 0.066±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179869 ENST00000411975 N/A 0.083±0.00 N/A 0.029±0.00 0.038±0.00 0.026±0.00 0.020±0.00 0.139±0.00 N/A 1.297±0.00 0.044±0.00 0.102±0.09 0.034±0.00 0.725±0.29
ENST00000417403 0.075±0.00 N/A 0.393±0.00 0.060±0.00 0.032±0.00 N/A N/A 0.113±0.00 N/A 1.455±0.00 N/A N/A N/A N/A
ENST00000435451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435803 N/A N/A N/A 0.006±0.00 0.002±0.00 0.004±0.00 0.007±0.00 N/A N/A 0.531±0.02 N/A 0.027±0.00 N/A 0.023±0.00
ENST00000453246 N/A 0.071±0.00 N/A 0.089±0.00 0.044±0.00 0.027±0.00 0.048±0.00 0.095±0.00 N/A N/A N/A 0.174±0.00 0.033±0.00 0.364±0.00
ENST00000484268 N/A N/A 0.251±0.00 0.019±0.00 N/A N/A N/A 0.184±0.00 0.065±0.00 N/A N/A 0.050±0.00 N/A N/A
ENST00000544596 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.744±0.00 N/A 0.035±0.04 N/A N/A
ENST00000611776 N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A
ENSG00000188730 ENST00000340652 0.021±0.00 0.112±0.00 0.005±0.00 1.048±0.26 0.020±0.02 0.024±0.01 1.965±0.00 0.039±0.00 0.007±0.01 0.063±0.02 0.033±0.00 0.515±0.42 0.011±0.01 0.087±0.01
ENSG00000218305 ENST00000428251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.566±0.00
ENSG00000225705 ENST00000424687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.474±0.32
ENSG00000228173 ENST00000456513 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.695±0.00 N/A N/A N/A 0.278±0.19
ENSG00000229165 ENST00000429312 0.032±0.00 0.016±0.00 N/A 0.008±0.00 N/A 0.052±0.00 N/A 0.016±0.00 0.007±0.00 0.007±0.00 N/A N/A N/A 0.036±0.00
ENSG00000234686 ENST00000440455 0.084±0.00 0.031±0.00 N/A 0.097±0.00 0.083±0.00 0.065±0.00 0.030±0.00 0.015±0.00 N/A N/A 0.028±0.00 N/A N/A 0.085±0.03
ENSG00000279104 ENST00000624154 N/A 0.028±0.00 N/A 0.042±0.00 0.021±0.00 N/A 0.013±0.00 0.027±0.00 N/A 0.204±0.19 N/A 0.103±0.06 N/A 0.043±0.00
ENSG00000279578 ENST00000622993 N/A 0.006±0.00 N/A 0.014±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004668 ENSMUST00000042740 0.002±0.00 0.007±0.00 0.004±0.00 0.006±0.00 0.007±0.00 0.028±0.01 0.005±0.00 2.233±0.95 0.083±0.06 0.018±0.01 0.002±0.00 0.034±0.02 0.005±0.01 0.035±0.01
ENSMUST00000141233 N/A N/A N/A N/A N/A 0.051±0.02 N/A N/A N/A N/A N/A 0.032±0.02 N/A N/A
ENSMUST00000151522 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A 0.164±0.00 N/A N/A
ENSMUSG00000050830 ENSMUST00000056344 0.180±0.06 0.376±0.27 1.617±0.00 3.653±1.39 0.072±0.05 0.135±0.09 0.544±0.06 0.033±0.01 0.045±0.05 0.179±0.05 0.081±0.05 0.351±0.13 0.125±0.03 0.113±0.00
ENSMUST00000109681 0.092±0.02 0.229±0.10 N/A 0.242±0.06 0.034±0.01 0.094±0.00 0.054±0.02 0.027±0.01 0.010±0.00 0.029±0.00 0.014±0.00 0.110±0.07 N/A 0.049±0.02
ENSMUST00000129670 0.025±0.00 N/A N/A 0.492±0.00 0.021±0.00 N/A N/A 0.024±0.01 0.006±0.00 0.036±0.00 N/A 0.013±0.00 N/A 0.058±0.02
ENSMUST00000154155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.176±0.00 N/A
ENSMUSG00000081629 ENSMUST00000117907 N/A N/A 0.107±0.08 0.037±0.02 N/A N/A N/A N/A 0.132±0.01 N/A 0.087±0.00 0.130±0.06 0.053±0.04 0.824±0.44
ENSMUSG00000082312 ENSMUST00000117538 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084091 ENSMUST00000121099 1.029±0.00 1.736±0.56 3.311±2.04 3.756±0.65 N/A 2.659±0.00 1.116±0.59 0.720±0.18 0.919±0.52 1.493±0.00 0.495±0.00 4.237±0.85 1.779±0.89 0.641±0.05

Loading