C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006LI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188730-ENSG00000042813 CGP 9606 7:49773661-50121329
GeneTranscriptPositionBiotype
ENSG00000042813 (ZPBP)
zona pellucida binding protein 		ENST00000046087 (ZPBP-001) 49937441-50093264 protein_coding
ENST00000413331 (ZPBP-004) 50081860-50093232 nonsense_mediated_decay
ENST00000419417 (ZPBP-003) 49937528-50093236 protein_coding
ENST00000450231 (ZPBP-006) 50081774-50121329 protein_coding
ENST00000465922 (ZPBP-002) 49850478-49936161 processed_transcript
ENST00000491129 (ZPBP-005) 49850421-50056424 processed_transcript
ENSG00000164500 (C7orf72)
chromosome 7 open reading frame 72 		ENST00000297001 (C7orf72-001) 50096036-50159830 protein_coding
ENSG00000188730 (VWC2)
von Willebrand factor C domain containing 2 		ENST00000340652 (VWC2-001) 49773661-49921950 protein_coding
ENSG00000223893 (GNL2P1)
guanine nucleotide binding protein-like 2 (nucleolar) pseudogene 1 		ENST00000451274 (GNL2P1-001) 49942251-49944440 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006LI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050830-ENSMUSG00000020193 CGP 10090 11:11114223-11462408
GeneTranscriptPositionBiotype
ENSMUSG00000020191 (4930415F15Rik)
RIKEN cDNA 4930415F15 gene 		ENSMUST00000020410 (4930415F15Rik-002) 11487671-11515192 protein_coding
ENSMUST00000109678 (4930415F15Rik-001) 11489266-11515190 protein_coding
ENSMUST00000170661 (4930415F15Rik-003) 11462094-11488537 processed_transcript
ENSMUSG00000020193 (Zpbp)
zona pellucida binding protein 		ENSMUST00000020413 (Zpbp-001) 11279626-11462408 protein_coding
ENSMUSG00000050830 (Vwc2)
von Willebrand factor C domain containing 2 		ENSMUST00000056344 (Vwc2-201) 11115851-11266638 protein_coding
ENSMUST00000109681 (Vwc2-001) 11114223-11263526 protein_coding
ENSMUST00000129670 (Vwc2-002) 11114744-11268931 nonsense_mediated_decay
ENSMUST00000154155 (Vwc2-003) 11116485-11131183 processed_transcript
ENSMUSG00000064766 (Gm26458)
predicted gene, 26458 		ENSMUST00000082832 (Gm26458-201) 11427385-11427512 snoRNA
ENSMUSG00000081325 (Gm12599)
predicted gene 12599 		ENSMUST00000120534 (Gm12599-001) 11436984-11437775 processed_pseudogene
ENSMUSG00000082875 (Gm12598)
predicted gene 12598 		ENSMUST00000117333 (Gm12598-001) 11312433-11313262 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LI_0001ENSG00000042813ENST00000046087ENST00000413331ENST00000419417ENST00000450231ENST00000465922ENST00000491129ENSG00000164500ENST00000297001ENSG00000188730ENST00000340652ENSG00000223893ENST00000451274CIL_0006LI_0002ENSMUSG00000020191ENSMUST00000020410ENSMUST00000109678ENSMUST00000170661ENSMUSG00000020193ENSMUST00000020413ENSMUSG00000050830ENSMUST00000056344ENSMUST00000109681ENSMUST00000129670ENSMUST00000154155ENSMUSG00000064766ENSMUST00000082832ENSMUSG00000081325ENSMUST00000120534ENSMUSG00000082875ENSMUST00000117333
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LI_0001ENSG00000042813ENST00000046087ENST00000413331ENST00000419417ENST00000465922ENSG00000164500ENST00000297001ENSG00000188730ENST00000340652ENSG00000223893ENST00000451274CIL_0006LI_0002ENSMUSG00000020191ENSMUST00000020410ENSMUST00000109678ENSMUST00000170661ENSMUSG00000020193ENSMUST00000020413ENSMUSG00000050830ENSMUST00000056344ENSMUST00000109681ENSMUST00000129670ENSMUST00000154155ENSMUSG00000064766ENSMUST00000082832ENSMUSG00000081325ENSMUST00000120534ENSMUSG00000082875ENSMUST00000117333
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000042813 ENST00000046087 N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A 25.279±3.98
ENST00000413331 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A
ENST00000419417 0.056±0.00 0.177±0.00 N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A 0.059±0.00 N/A 32.469±14.71
ENST00000450231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465922 N/A N/A N/A 0.066±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164500 ENST00000297001 N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A 1.522±0.57
ENSG00000188730 ENST00000340652 0.021±0.00 0.112±0.00 0.005±0.00 1.048±0.26 0.020±0.02 0.024±0.01 1.965±0.00 0.039±0.00 0.007±0.01 0.063±0.02 0.033±0.00 0.515±0.42 0.011±0.01 0.087±0.01
ENSG00000223893 ENST00000451274 N/A N/A N/A 0.024±0.00 N/A N/A 0.030±0.01 N/A N/A 0.010±0.00 N/A 0.029±0.02 N/A 0.428±0.42
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020191 ENSMUST00000020410 N/A N/A N/A N/A N/A N/A N/A 0.205±0.05 N/A N/A 0.106±0.00 0.308±0.06 N/A N/A
ENSMUST00000109678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.01 0.046±0.00 N/A N/A
ENSMUST00000170661 N/A 3.760±0.59 N/A N/A 0.900±0.38 0.512±0.24 0.710±0.24 0.745±0.23 N/A 0.816±0.33 N/A 1.761±0.47 N/A N/A
ENSMUSG00000020193 ENSMUST00000020413 0.296±0.07 0.701±0.61 0.065±0.01 0.098±0.00 0.262±0.11 0.033±0.01 0.163±0.03 0.191±0.07 0.070±0.03 0.150±0.05 0.017±0.01 0.290±0.21 0.027±0.02 29.116±24.17
ENSMUSG00000050830 ENSMUST00000056344 0.180±0.06 0.376±0.27 1.617±0.00 3.653±1.39 0.072±0.05 0.135±0.09 0.544±0.06 0.033±0.01 0.045±0.05 0.179±0.05 0.081±0.05 0.351±0.13 0.125±0.03 0.113±0.00
ENSMUST00000109681 0.092±0.02 0.229±0.10 N/A 0.242±0.06 0.034±0.01 0.094±0.00 0.054±0.02 0.027±0.01 0.010±0.00 0.029±0.00 0.014±0.00 0.110±0.07 N/A 0.049±0.02
ENSMUST00000129670 0.025±0.00 N/A N/A 0.492±0.00 0.021±0.00 N/A N/A 0.024±0.01 0.006±0.00 0.036±0.00 N/A 0.013±0.00 N/A 0.058±0.02
ENSMUST00000154155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.176±0.00 N/A
ENSMUSG00000064766 ENSMUST00000082832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.171±0.00
ENSMUSG00000081325 ENSMUST00000120534 0.072±0.00 N/A 0.068±0.02 0.073±0.01 N/A 0.215±0.00 N/A 0.074±0.00 0.054±0.03 0.105±0.00 0.040±0.01 0.030±0.00 0.044±0.01 0.222±0.10
ENSMUSG00000082875 ENSMUST00000117333 N/A N/A 0.011±0.00 0.011±0.00 N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A 0.080±0.04

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