C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CDK5 regulatory subunit associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109730 Cdk5rap1-003 ENSMUSG00000027487 10090 - 2:154361250-154372731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENSMUST00000109730
Transcript ID Breast Ovary
ENSMUST00000109730 1.218±0.00 2.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000521 CIL_000521_0002 CGP 2:154335380-154408099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0009451 IEA RNA modification
GO:0051539 IEA 4 iron, 4 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339269 CDK5RAP1-012 protein_coding Homo_sapiens 0 542
ENST00000346416 CDK5RAP1-010 protein_coding Homo_sapiens 0 542
ENST00000357886 CDK5RAP1-011 protein_coding Homo_sapiens 0 542
ENST00000473997 CDK5RAP1-013 protein_coding Homo_sapiens 0 490
ENST00000477105 CDK5RAP1-016 processed_transcript Homo_sapiens 0 333

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