C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK5 regulatory subunit associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477105 CDK5RAP1-016 ENSG00000101391 9606 - 20:33374115-33401505 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungOvaryENST00000477105
Transcript ID Bladder Brain Breast Liver Lung Ovary
ENST00000477105 1.057±0.00 2.087±0.00 1.896±0.00 1.730±0.00 1.561±0.00 2.809±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000521 CIL_000521_0001 CGP 20:33358839-33443892

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028990 Cdk5rap1-201 protein_coding Mus_musculus 0 1103
ENSMUST00000148289 Cdk5rap1-002 processed_transcript Mus_musculus 0 1103
ENSMUST00000109731 Cdk5rap1-001 protein_coding Mus_musculus 0 1103
ENSMUST00000152180 Cdk5rap1-006 retained_intron Mus_musculus 0 536
ENSMUST00000150308 Cdk5rap1-004 processed_transcript Mus_musculus 0 333
ENSMUST00000109730 Cdk5rap1-003 protein_coding Mus_musculus 0 333

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