C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416967 TXN2-002 ENSG00000100348 9606 - 22:36467046-36481634 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000416967
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000416967 20.886±0.00 28.263±0.00 3.683±0.00 17.108±12.55 17.376±15.73 26.253±0.00 17.631±16.73 18.254±12.30 44.062±0.00 9.902±8.33 22.007±9.76 27.964±20.07 56.204±18.64 22.421±9.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EZ CIL_0006EZ_0002 CGP 22:36281281-36482030
CIL_0001W0 CIL_0001W0_0001 CGP 22:36467036-36507101

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006662 IEA glycerol ether metabolic process
GO:0015035 IEA protein disulfide oxidoreductase activity
GO:0045454 IEA cell redox homeostasis
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109748 Txn2-004 protein_coding Mus_musculus 0 507
ENSMUST00000005487 Txn2-001 protein_coding Mus_musculus 0 507
ENSMUST00000173631 Txn2-008 protein_coding Mus_musculus 0 472

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