C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | DNA methyltransferase 3B | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000109774  |
Dnmt3b-001 |
ENSMUSG00000027478 |
10090 | + |
2:153649453-153687730  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008A4 | CIL_0008A4_0002 | VISTA | 2:153181176-153785061 |
| CIL_0008NQ | CIL_0008NQ_0002 | VISTA | 2:153260290-153861940 |
| CIL_0008QN | CIL_0008QN_0002 | VISTA | 2:153551282-154154369 |
| CIL_00036W | CIL_00036W_0002 | CGP | 2:153616933-153687730 |
| CIL_0001KC | CIL_0001KC_0002 | CGP | 2:153649450-153773310 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000122 | IMP | negative regulation of transcription from RNA polymerase II promoter |
| GO:0000775 | IDA | chromosome, centromeric region |
| GO:0000792 | IDA | heterochromatin |
| GO:0003677 | IDA | DNA binding |
| GO:0003886 | IDA | DNA (cytosine-5-)-methyltransferase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005720 | IDA | nuclear heterochromatin |
| GO:0006306 | IGI | DNA methylation |
| GO:0006346 | IGI | methylation-dependent chromatin silencing |
| GO:0006349 | IMP | regulation of gene expression by genetic imprinting |
| GO:0008168 | IDA | methyltransferase activity |
| GO:0031503 | IDA | protein complex localization |
| GO:0043045 | IEP | DNA methylation involved in embryo development |
| GO:0045814 | IMP | negative regulation of gene expression, epigenetic |
| GO:0046872 | IEA | metal ion binding |
| GO:0071230 | IDA | cellular response to amino acid stimulus |
| GO:0090116 | IEA | C-5 methylation of cytosine |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000201963
|
DNMT3B-004 | protein_coding | Homo_sapiens | 0 | 1511 |
|
ENST00000328111
|
DNMT3B-001 | protein_coding | Homo_sapiens | 0 | 2170 |
|
ENST00000348286
|
DNMT3B-003 | protein_coding | Homo_sapiens | 0 | 595 |
|
ENST00000353855
|
DNMT3B-002 | protein_coding | Homo_sapiens | 0 | 1511 |
|
ENST00000443239
|
DNMT3B-006 | protein_coding | Homo_sapiens | 0 | 595 |
|
ENST00000456297
|
DNMT3B-005 | protein_coding | Homo_sapiens | 0 | 595 |
