| Transcript ID | Heart | Kidney | Lung |
|---|---|---|---|
| ENST00000456297 | 0.203±0.00 | 0.137±0.00 | 0.034±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | DNA (cytosine-5-)-methyltransferase 3 beta | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000456297  |
DNMT3B-005 |
ENSG00000088305 |
9606 | + |
20:32762642-32808069  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008A4 | CIL_0008A4_0001 | VISTA | 20:32224531-32829311 |
| CIL_0008NQ | CIL_0008NQ_0001 | VISTA | 20:32326689-32928341 |
| CIL_0008QN | CIL_0008QN_0001 | VISTA | 20:32676112-33281064 |
| CIL_00036W | CIL_00036W_0001 | CGP | 20:32702691-32809356 |
| CIL_0001KC | CIL_0001KC_0001 | CGP | 20:32762385-32850405 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000122 | IDA | negative regulation of transcription from RNA polymerase II promoter |
| GO:0003714 | IDA | transcription corepressor activity |
| GO:0003886 | TAS | DNA (cytosine-5-)-methyltransferase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0006306 | TAS | DNA methylation |
| GO:0008168 | IEA | methyltransferase activity |
| GO:0009008 | NAS | DNA-methyltransferase activity |
| GO:0010628 | IMP | positive regulation of gene expression |
| GO:0043231 | IDA | intracellular membrane-bounded organelle |
| GO:0046872 | IEA | metal ion binding |
| GO:0051571 | IMP | positive regulation of histone H3-K4 methylation |
| GO:0051573 | IMP | negative regulation of histone H3-K9 methylation |
| GO:0090116 | IEA | C-5 methylation of cytosine |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000103150
|
Dnmt3b-008 | protein_coding | Mus_musculus | 0 | 1735 |
|
ENSMUST00000103151
|
Dnmt3b-006 | protein_coding | Mus_musculus | 0 | 1735 |
|
ENSMUST00000081628
|
Dnmt3b-004 | protein_coding | Mus_musculus | 0 | 1565 |
|
ENSMUST00000109773
|
Dnmt3b-003 | protein_coding | Mus_musculus | 0 | 1565 |
|
ENSMUST00000119996
|
Gm14490-001 | unprocessed_pseudogene | Mus_musculus | 0 | 1199 |
|
ENSMUST00000056495
|
Dnmt3b-201 | protein_coding | Mus_musculus | 0 | 595 |
|
ENSMUST00000109771
|
Dnmt3b-009 | protein_coding | Mus_musculus | 0 | 595 |
|
ENSMUST00000109772
|
Dnmt3b-007 | protein_coding | Mus_musculus | 0 | 595 |
|
ENSMUST00000088976
|
Dnmt3b-005 | protein_coding | Mus_musculus | 0 | 595 |
|
ENSMUST00000109774
|
Dnmt3b-001 | protein_coding | Mus_musculus | 0 | 595 |
|
ENSMUST00000072997
|
Dnmt3b-002 | protein_coding | Mus_musculus | 0 | 595 |
|
ENSMUST00000132132
|
Dnmt3b-010 | retained_intron | Mus_musculus | 0 | 265 |
