C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cerebral cavernous malformation 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109800 Ccm2l-002 ENSMUSG00000027474 10090 + 2:153066002-153081735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000109800
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000109800 1.333±0.00 3.556±0.80 1.308±0.37 0.676±0.11 2.771±0.01 1.003±0.00 1.721±0.00 0.665±0.00 14.665±3.70 2.466±1.26 3.428±0.00 0.079±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0000C8 CIL_0000C8_0003 CGP 2:153031852-153081735
CIL_0004A2 CIL_0004A2_0002 CGP 2:153065955-153151441

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003209 IGI cardiac atrium morphogenesis
GO:0003222 IGI ventricular trabecula myocardium morphogenesis
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0032091 IDA negative regulation of protein binding
GO:0034111 IDA negative regulation of homotypic cell-cell adhesion
GO:0042060 IMP wound healing
GO:0055017 IGI cardiac muscle tissue growth
GO:0090271 IGI positive regulation of fibroblast growth factor production

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262659 CCM2L-001 protein_coding Homo_sapiens 0 1783
ENST00000452892 CCM2L-003 protein_coding Homo_sapiens 0 590

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