C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TPX2, microtubule-associated protein homolog (Xenopus laevis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109816 Tpx2-002 ENSMUSG00000027469 10090 + 2:152847978-152894654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109816
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109816 0.653±0.21 0.327±0.20 0.456±0.24 3.496±2.69 0.722±0.00 0.075±0.02 0.038±0.00 17.805±17.86 0.173±0.00 0.246±0.04 2.323±1.12 8.671±6.55 2.811±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0001A2 CIL_0001A2_0002 CGP 2:152780668-152895321
CIL_000319 CIL_000319_0003 CGP 2:152847964-152923068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005819 IDA spindle
GO:0005874 IEA microtubule
GO:0006915 IEA apoptotic process
GO:0007067 IEA mitotic nuclear division
GO:0019901 IPI protein kinase binding
GO:0032147 ISS activation of protein kinase activity
GO:0043203 IDA axon hillock
GO:0060236 IMP regulation of mitotic spindle organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300403 TPX2-001 protein_coding Homo_sapiens 0 1951
ENST00000340513 TPX2-002 protein_coding Homo_sapiens 0 1232

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