C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) inhibitor subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109869 Psmf1-006 ENSMUSG00000032869 10090 - 2:151718265-151744186 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109869
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109869 11.648±0.83 10.979±3.30 10.069±1.45 13.659±0.53 9.870±1.61 10.963±1.50 6.834±3.04 10.423±3.64 14.939±5.04 8.959±0.41 4.969±0.58 15.835±2.30 17.623±9.52 260.616±76.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZT CIL_0001ZT_0002 CGP 2:151702008-151744186
CIL_0001ZN CIL_0001ZN_0002 CGP 2:151715812-151874668

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005783 ISS endoplasmic reticulum
GO:0005829 ISS cytosol
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0070628 ISS proteasome binding
GO:1901799 ISS negative regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246015 PSMF1-003 protein_coding Homo_sapiens 0 828
ENST00000333082 PSMF1-201 protein_coding Homo_sapiens 0 1116
ENST00000335877 PSMF1-006 protein_coding Homo_sapiens 0 1114
ENST00000381898 PSMF1-010 protein_coding Homo_sapiens 0 309
ENST00000435720 PSMF1-004 protein_coding Homo_sapiens 0 274
ENST00000479715 PSMF1-001 processed_transcript Homo_sapiens 0 621
ENST00000484891 PSMF1-005 processed_transcript Homo_sapiens 0 756

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