C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: syntrophin, basic 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110200 Sntb1-002 ENSMUSG00000060429 10090 - 15:55790964-55906722 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GD CIL_0002GD_0003 CGP 15:55557408-55906949
CIL_0002EA CIL_0002EA_0003 CGP 15:55638843-56694539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0030054 IEA cell junction
GO:0043234 ISO protein complex
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395601 SNTB1-001 protein_coding Homo_sapiens 0 1038
ENST00000517992 SNTB1-002 protein_coding Homo_sapiens 0 1038
ENST00000519177 SNTB1-003 processed_transcript Homo_sapiens 0 625

Loading