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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | syntrophin, basic 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000110200  |
Sntb1-002 |
ENSMUSG00000060429 |
10090 | - |
15:55790964-55906722  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002GD | CIL_0002GD_0003 | CGP | 15:55557408-55906949 |
| CIL_0002EA | CIL_0002EA_0003 | CGP | 15:55638843-56694539 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IEA | actin binding |
| GO:0005515 | IPI | protein binding |
| GO:0005516 | IEA | calmodulin binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0005856 | IEA | cytoskeleton |
| GO:0005886 | IEA | plasma membrane |
| GO:0030054 | IEA | cell junction |
| GO:0043234 | ISO | protein complex |
| GO:0045202 | IDA | synapse |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000395601
|
SNTB1-001 | protein_coding | Homo_sapiens | 0 | 1038 |
|
ENST00000517992
|
SNTB1-002 | protein_coding | Homo_sapiens | 0 | 1038 |
|
ENST00000519177
|
SNTB1-003 | processed_transcript | Homo_sapiens | 0 | 625 |
