C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620935 RP11-440E5.1-001 ENSG00000275834 9606 + 7:96306810-96306874 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastTestisENST00000620935
Transcript ID Breast Testis
ENST00000620935 1.236±0.00 0.537±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AS CIL_0008AS_0001 VISTA 7:95767218-96367717
CIL_00053F CIL_00053F_0001 CGP 7:95772506-96322147
CIL_0008Z2 CIL_0008Z2_0001 VISTA 7:95775777-96376384
CIL_0008Z3 CIL_0008Z3_0001 VISTA 7:95796967-96398368
CIL_0007W8 CIL_0007W8_0001 VISTA 7:95945535-96548789
CIL_00097Z CIL_00097Z_0001 VISTA 7:96146093-96746679
CIL_000980 CIL_000980_0001 VISTA 7:96195606-96796103
CIL_000981 CIL_000981_0001 VISTA 7:96291763-96892262

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102482 Gm12481-001 processed_pseudogene Mus_musculus 1e-24 113
ENSMUST00000134487 Fam221b-002 retained_intron Mus_musculus 1e-24 113
ENSMUST00000099475 Serf2-004 protein_coding Mus_musculus 1e-24 113
ENSMUST00000110615 Serf2-003 protein_coding Mus_musculus 1e-24 113
ENSMUST00000134412 Serf2-002 retained_intron Mus_musculus 1e-24 113
ENSMUST00000139253 Serf2-001 protein_coding Mus_musculus 1e-24 113

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