C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF7)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110904 Arhgef7-003 ENSMUSG00000031511 10090 + 8:11782641-11835219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000110904
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110904 3.196±0.32 3.154±0.04 6.234±2.06 2.875±0.00 4.210±0.58 1.053±0.00 6.183±0.44 1.686±0.04 5.985±1.24 2.390±0.00 7.348±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080T CIL_00080T_0002 VISTA 8:11596202-12196925
CIL_0007MP CIL_0007MP_0002 UCNEbase 8:11623645-11913000
CIL_00012L CIL_00012L_0002 CGP 8:11728105-11855761

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218789 ARHGEF7-001 protein_coding Homo_sapiens 0 1334
ENST00000317133 ARHGEF7-008 protein_coding Homo_sapiens 0 1334
ENST00000375723 ARHGEF7-005 protein_coding Homo_sapiens 0 1334
ENST00000375736 ARHGEF7-007 protein_coding Homo_sapiens 0 1334
ENST00000375739 ARHGEF7-201 protein_coding Homo_sapiens 0 1334
ENST00000375741 ARHGEF7-202 protein_coding Homo_sapiens 0 1334
ENST00000426073 ARHGEF7-004 protein_coding Homo_sapiens 0 1334
ENST00000426768 ARHGEF7-009 protein_coding Homo_sapiens 0 239
ENST00000449979 ARHGEF7-003 protein_coding Homo_sapiens 0 239
ENST00000466143 ARHGEF7-013 protein_coding Homo_sapiens 0 1334
ENST00000467053 ARHGEF7-016 protein_coding Homo_sapiens 0 231
ENST00000469877 ARHGEF7-012 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000478679 ARHGEF7-011 protein_coding Homo_sapiens 0 996
ENST00000544132 ARHGEF7-018 protein_coding Homo_sapiens 0 348

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