C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438937 ZSCAN21-002 ENSG00000166529 9606 + 7:100049794-100057841 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleENST00000438937
Transcript ID Lung Muscle
ENST00000438937 4.002±0.00 4.538±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0002F6 CIL_0002F6_0001 CGP 7:100015572-100065038
CIL_0005LO CIL_0005LO_0001 CGP 7:100049774-100082548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110959 Zscan21-005 protein_coding Mus_musculus 0 388
ENSMUST00000110960 Zscan21-002 protein_coding Mus_musculus 0 388
ENSMUST00000080732 Zscan21-004 protein_coding Mus_musculus 0 388
ENSMUST00000110961 Zscan21-001 protein_coding Mus_musculus 0 388
ENSMUST00000062350 Zscan21-003 protein_coding Mus_musculus 0 388
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 5.60519e-45 185
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 5.60519e-45 185
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 1e-35 154
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 1e-35 154
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 1e-35 154
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 1e-35 154
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 1e-35 154
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 1e-35 154
ENSMUST00000031632 Zkscan14-001 protein_coding Mus_musculus 2e-33 147
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 7e-24 115
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 7e-24 115
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 7e-24 115
ENSMUST00000134522 Zkscan17-004 processed_transcript Mus_musculus 2e-23 113
ENSMUST00000013262 Zkscan17-001 protein_coding Mus_musculus 2e-23 113
ENSMUST00000140795 Abat-002 retained_intron Mus_musculus 0.000001 58

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