C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 binding protein kinase alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111117 Cdc42bpa-001 ENSMUSG00000026490 10090 + 1:179960585-180165603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverPlacentaENSMUST00000111117
Transcript ID Adipose Bladder Brain Liver Placenta
ENSMUST00000111117 3.373±0.00 4.133±0.84 6.335±1.62 2.163±0.24 0.622±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000985 CIL_000985_0002 VISTA 1:179908053-180512549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0000287 IEA magnesium ion binding
GO:0005083 IEA small GTPase regulator activity
GO:0007097 IMP nuclear migration
GO:0016477 IEA cell migration
GO:0031032 IEA actomyosin structure organization
GO:0031532 IEA actin cytoskeleton reorganization
GO:0035556 IEA intracellular signal transduction
GO:0042641 IEA actomyosin
GO:0042802 IEA identical protein binding
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334218 CDC42BPA-003 protein_coding Homo_sapiens 0 7522
ENST00000366764 CDC42BPA-201 protein_coding Homo_sapiens 0 4501
ENST00000366766 CDC42BPA-202 protein_coding Homo_sapiens 0 4638
ENST00000366767 CDC42BPA-002 protein_coding Homo_sapiens 0 2822
ENST00000366769 CDC42BPA-001 protein_coding Homo_sapiens 0 4638
ENST00000429440 CDC42BPA-007 protein_coding Homo_sapiens 0 2039
ENST00000441725 CDC42BPA-005 protein_coding Homo_sapiens 0 1967
ENST00000442054 CDC42BPA-004 protein_coding Homo_sapiens 0 2822
ENST00000448940 CDC42BPA-006 protein_coding Homo_sapiens 0 2309
ENST00000462553 CDC42BPA-009 processed_transcript Homo_sapiens 0 231
ENST00000466538 CDC42BPA-011 processed_transcript Homo_sapiens 0 316
ENST00000478573 CDC42BPA-010 retained_intron Homo_sapiens 0 680
ENST00000488131 CDC42BPA-008 processed_transcript Homo_sapiens 0 791

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