| Transcript ID | Brain | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENSMUST00000111438 | 6.520±0.00 | 4.561±3.27 | 6.936±2.03 | 1.770±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000111438  |
Ddx55-002 |
ENSMUSG00000029389 |
10090 | + |
5:124552914-124569660  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003J8 | CIL_0003J8_0002 | CGP | 5:124540695-124569660 |
| CIL_000395 | CIL_000395_0002 | CGP | 5:124552864-124579131 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003723 | IEA | RNA binding |
| GO:0005524 | IEA | ATP binding |
| GO:0006200 | IEA | ATP catabolic process |
| GO:0008026 | IEA | ATP-dependent helicase activity |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000238146
|
DDX55-001 | protein_coding | Homo_sapiens | 0 | 1853 |
|
ENST00000354291
|
DDX55-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 518 |
|
ENST00000538744
|
DDX55-004 | protein_coding | Homo_sapiens | 0 | 1061 |
|
ENST00000539934
|
DDX55-002 | retained_intron | Homo_sapiens | 0 | 876 |
|
ENST00000541259
|
DDX55-015 | processed_transcript | Homo_sapiens | 0 | 318 |
|
ENST00000542286
|
DDX55-003 | retained_intron | Homo_sapiens | 0 | 1173 |
|
ENST00000543016
|
DDX55-013 | retained_intron | Homo_sapiens | 0 | 189 |
|
ENST00000544738
|
DDX55-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 942 |
