C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111560 Sec22c-001 ENSMUSG00000061536 10090 - 9:121683022-121705465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverLungMusclePlacentaTestisENSMUST00000111560
Transcript ID Adrenal Colon Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000111560 1.080±0.39 0.798±0.12 0.478±0.00 0.399±0.00 0.736±0.00 0.388±0.00 0.436±0.19 0.983±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000480 CIL_000480_0002 CGP 9:121642716-121705490
CIL_00047Z CIL_00047Z_0002 CGP 9:121680047-121712921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006810 IEA transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264454 SEC22C-002 protein_coding Homo_sapiens 0 902
ENST00000451653 SEC22C-003 protein_coding Homo_sapiens 0 671

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