Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	RecQ protein-like
ENSMUST00000111803	Recql-001	ENSMUSG00000030243	10090	-	6:142361376-142387087	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000111803	2.178±0.66	1.126±0.23	4.646±0.35	4.911±1.78	1.519±0.21	1.593±0.11	0.895±0.31	1.433±0.55	4.441±4.11	3.425±0.20	1.689±0.35	2.000±1.07	4.985±1.62	3.840±1.07

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0006XQ	CIL_0006XQ_0003	CGP	6:142298423-142363257
CIL_0005PY	CIL_0005PY_0002	CGP	6:142345654-142387087
CIL_0005PT	CIL_0005PT_0002	CGP	6:142350342-142403858

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000733	IEA	DNA strand renaturation
GO:0003677	IEA	DNA binding
GO:0003678	IEA	DNA helicase activity
GO:0005515	IEA	protein binding
GO:0005524	IEA	ATP binding
GO:0005634	IEA	nucleus
GO:0006200	IEA	ATP catabolic process
GO:0006260	IEA	DNA replication
GO:0006281	IEA	DNA repair
GO:0006310	IEA	DNA recombination
GO:0016020	IEA	membrane
GO:0032508	IEA	DNA duplex unwinding
GO:0036310	IEA	annealing helicase activity
GO:0043140	IEA	ATP-dependent 3'-5' DNA helicase activity

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000314748	RECQL-005	protein_coding	Homo_sapiens	0	508
ENST00000396093	RECQL-007	protein_coding	Homo_sapiens	0	553
ENST00000421138	RECQL-002	protein_coding	Homo_sapiens	0	1559
ENST00000444129	RECQL-001	protein_coding	Homo_sapiens	0	1559
ENST00000536240	RECQL-006	protein_coding	Homo_sapiens	0	202
ENST00000536964	RECQL-008	protein_coding	Homo_sapiens	1.4013e-45	187
ENST00000542432	RECQL-004	protein_coding	Homo_sapiens	0	259

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