C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RecQ protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111803 Recql-001 ENSMUSG00000030243 10090 - 6:142361376-142387087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111803
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111803 2.178±0.66 1.126±0.23 4.646±0.35 4.911±1.78 1.519±0.21 1.593±0.11 0.895±0.31 1.433±0.55 4.441±4.11 3.425±0.20 1.689±0.35 2.000±1.07 4.985±1.62 3.840±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XQ CIL_0006XQ_0003 CGP 6:142298423-142363257
CIL_0005PY CIL_0005PY_0002 CGP 6:142345654-142387087
CIL_0005PT CIL_0005PT_0002 CGP 6:142350342-142403858

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000733 IEA DNA strand renaturation
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006200 IEA ATP catabolic process
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0016020 IEA membrane
GO:0032508 IEA DNA duplex unwinding
GO:0036310 IEA annealing helicase activity
GO:0043140 IEA ATP-dependent 3'-5' DNA helicase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314748 RECQL-005 protein_coding Homo_sapiens 0 508
ENST00000396093 RECQL-007 protein_coding Homo_sapiens 0 553
ENST00000421138 RECQL-002 protein_coding Homo_sapiens 0 1559
ENST00000444129 RECQL-001 protein_coding Homo_sapiens 0 1559
ENST00000536240 RECQL-006 protein_coding Homo_sapiens 0 202
ENST00000536964 RECQL-008 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000542432 RECQL-004 protein_coding Homo_sapiens 0 259

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