C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor kinase-interactor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112185 Git2-001 ENSMUSG00000041890 10090 - 5:114727407-114773495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112185
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112185 8.864±3.32 9.080±1.06 5.444±0.09 4.520±1.20 2.875±0.00 3.216±1.70 1.989±0.44 1.809±0.29 15.335±4.15 2.499±0.27 5.921±2.50 7.359±3.08 0.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GG CIL_0001GG_0003 CGP 5:114707760-114775517
CIL_0001GH CIL_0001GH_0003 CGP 5:114727407-114806200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005654 IEA nucleoplasm
GO:0005925 IEA focal adhesion
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity
GO:0048266 IMP behavioral response to pain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320063 GIT2-007 protein_coding Homo_sapiens 0 1524
ENST00000354574 GIT2-201 protein_coding Homo_sapiens 0 1792
ENST00000355312 GIT2-001 protein_coding Homo_sapiens 0 1515
ENST00000361006 GIT2-004 protein_coding Homo_sapiens 0 1539
ENST00000457474 GIT2-010 protein_coding Homo_sapiens 0 1744
ENST00000546613 GIT2-017 processed_transcript Homo_sapiens 0 335
ENST00000547267 GIT2-014 retained_intron Homo_sapiens 0 566
ENST00000547815 GIT2-006 protein_coding Homo_sapiens 0 1524
ENST00000548000 GIT2-018 processed_transcript Homo_sapiens 0 390
ENST00000548643 GIT2-012 retained_intron Homo_sapiens 0 839
ENST00000548655 GIT2-019 processed_transcript Homo_sapiens 0 287
ENST00000549524 TCHP-010 retained_intron Homo_sapiens 0.000000000001 81
ENST00000549999 GIT2-009 retained_intron Homo_sapiens 0 283
ENST00000550186 GIT2-005 protein_coding Homo_sapiens 0 1279
ENST00000551209 GIT2-011 protein_coding Homo_sapiens 0 2449
ENST00000551455 GIT2-002 retained_intron Homo_sapiens 0 1572
ENST00000551721 GIT2-015 retained_intron Homo_sapiens 0 289
ENST00000552978 GIT2-023 retained_intron Homo_sapiens 0 401
ENST00000553118 GIT2-008 protein_coding Homo_sapiens 0 1572

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