C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box N2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112238 Foxn2-001 ENSMUSG00000034998 10090 + 17:88440711-88490533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112238 3.178±0.61 1.217±0.56 2.502±0.35 1.690±0.56 1.683±0.87 1.060±0.43 0.689±0.28 1.359±0.36 2.466±1.13 3.978±0.78 2.215±0.44 2.951±1.39 5.432±2.07 0.619±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063U CIL_00063U_0002 CGP 17:87990859-88490533
CIL_000008 CIL_000008_0002 CGP 17:88440711-88588367

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035914 IMP skeletal muscle cell differentiation
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340553 FOXN2-001 protein_coding Homo_sapiens 0 1293
ENST00000413569 FOXN2-002 protein_coding Homo_sapiens 0 1031
ENST00000616844 FOXN2-201 protein_coding Homo_sapiens 0 1266

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