C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392690 B3GALT1-001 ENSG00000172318 9606 + 2:167868948-167874041 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverLungMuscleOvaryPlacentaENST00000392690
Transcript ID Adipose Brain Breast Kidney Liver Lung Muscle Ovary Placenta
ENST00000392690 0.161±0.00 0.622±0.10 0.357±0.00 0.026±0.00 0.005±0.00 0.057±0.02 0.988±0.00 0.279±0.00 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HO CIL_0000HO_0001 CGP 2:166888487-167874041
CIL_00063B CIL_00063B_0001 CGP 2:167868948-168248141

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0006486 IEA protein glycosylation
GO:0008378 IEA galactosyltransferase activity
GO:0008499 IDA UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO:0009312 IEA oligosaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112346 B3galt1-201 protein_coding Mus_musculus 0 1585
ENSMUST00000042456 B3galt1-001 protein_coding Mus_musculus 0 1585
ENSDART00000113248 B3GALT1-201 protein_coding Danio_rerio 0 377
ENSMUST00000180887 B3galt1-002 protein_coding Mus_musculus 0 366

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