C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112568 Tanc1-001 ENSMUSG00000035168 10090 + 2:59612042-59845717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112568
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112568 3.238±0.23 2.950±1.19 3.223±0.51 3.117±3.26 3.560±1.06 3.201±0.92 2.525±0.73 3.560±1.62 0.547±0.18 8.500±1.70 0.740±0.24 9.622±5.49 5.058±2.62 0.433±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083G CIL_00083G_0002 VISTA 2:59262344-59863132
CIL_0007X8 CIL_0007X8_0002 VISTA 2:59297936-59901449
CIL_0008PS CIL_0008PS_0002 VISTA 2:59368906-59972125
CIL_0005U4 CIL_0005U4_0002 CGP 2:59484653-59846149
CIL_0008P7 CIL_0008P7_0002 VISTA 2:59528773-60129361
CIL_0005U3 CIL_0005U3_0002 CGP 2:59612042-59882591

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007520 IMP myoblast fusion
GO:0008542 IMP visual learning
GO:0030425 IDA dendrite
GO:0043025 IDA neuronal cell body
GO:0043679 IDA axon terminus
GO:0097062 IMP dendritic spine maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263635 TANC1-001 protein_coding Homo_sapiens 0 6063
ENST00000454300 TANC1-201 protein_coding Homo_sapiens 0 1352
ENST00000464096 TANC1-002 retained_intron Homo_sapiens 0 281
ENST00000465963 TANC1-003 retained_intron Homo_sapiens 0 468
ENST00000470074 TANC1-004 retained_intron Homo_sapiens 0 2008
ENST00000496406 TANC1-005 retained_intron Homo_sapiens 0 1347

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