C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LY6/PLAUR domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409381 LYPD6-003 ENSG00000187123 9606 + 2:149329985-149473623 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000409381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000409381 0.091±0.00 0.116±0.00 0.097±0.00 1.275±0.01 0.096±0.04 0.537±0.28 0.062±0.04 0.192±0.00 0.118±0.00 0.033±0.00 0.270±0.14 2.052±0.36 0.695±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MG CIL_0006MG_0001 CGP 2:149038107-149474148
CIL_0007E0 CIL_0007E0_0001 CGP 2:149329985-149587816

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169232 Lypd6-202 protein_coding Mus_musculus 0 715
ENSMUST00000112712 Lypd6-201 protein_coding Mus_musculus 0 715
ENSMUST00000053208 Lypd6-001 protein_coding Mus_musculus 0 715
ENSMUST00000128451 Lypd6-002 protein_coding Mus_musculus 0 556
ENSMUST00000126337 Lypd6-003 protein_coding Mus_musculus 0 355

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