C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycosyltransferase-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392869 GTDC1-001 ENSG00000121964 9606 - 2:143938068-144235740 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLungMuscleOvaryPlacentaENST00000392869
Transcript ID Bladder Brain Heart Lung Muscle Ovary Placenta
ENST00000392869 0.115±0.00 1.809±0.08 0.454±0.00 0.608±0.00 0.136±0.00 0.718±0.00 0.219±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006M8 CIL_0006M8_0001 CGP 2:143091362-144332568
CIL_0008S0 CIL_0008S0_0001 VISTA 2:143654622-144256346
CIL_0007L9 CIL_0007L9_0003 UCNEbase 2:143915206-145198080
CIL_0006M9 CIL_0006M9_0001 CGP 2:143938068-144524580

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009058 IEA biosynthetic process
GO:0016740 IEA transferase activity
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112810 Gtdc1-001 protein_coding Mus_musculus 0 1938
ENSMUST00000049051 Gtdc1-201 protein_coding Mus_musculus 0 1932
ENSMUST00000134813 Gtdc1-011 processed_transcript Mus_musculus 0 898
ENSMUST00000148279 Gtdc1-003 protein_coding Mus_musculus 0 654
ENSMUST00000129240 Gtdc1-002 processed_transcript Mus_musculus 0 654
ENSMUST00000189018 Ccdc86-003 retained_intron Mus_musculus 0.00000002 68
ENSMUST00000169308 0610011F06Rik-006 protein_coding Mus_musculus 0.0000003 64
ENSMUST00000110456 0610011F06Rik-005 nonsense_mediated_decay Mus_musculus 0.0000003 64
ENSMUST00000146544 Golga2-011 processed_transcript Mus_musculus 0.0007 53

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