C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112939 Hnrnpd-003 ENSMUSG00000000568 10090 - 5:99960998-99978917 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112939
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112939 1.539±0.00 23.331±1.09 33.273±12.22 3.771±1.68 3.226±0.51 3.642±0.35 29.340±7.69 5.591±0.00 4.868±0.70 28.566±11.86 38.914±24.92 9.429±5.75

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0019013 IEA viral nucleocapsid
GO:0030529 IEA ribonucleoprotein complex
GO:0043488 IMP regulation of mRNA stability

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313899 HNRNPD-001 protein_coding Homo_sapiens 0 1892
ENST00000352301 HNRNPD-003 protein_coding Homo_sapiens 0 2447
ENST00000353341 HNRNPD-002 protein_coding Homo_sapiens 0 920
ENST00000503822 HNRNPD-007 protein_coding Homo_sapiens 0 776
ENST00000507010 HNRNPD-008 protein_coding Homo_sapiens 0 628
ENST00000508119 HNRNPD-012 processed_transcript Homo_sapiens 0 274
ENST00000509107 HNRNPD-009 protein_coding Homo_sapiens 0 383
ENST00000509263 HNRNPD-011 protein_coding Homo_sapiens 0 1153
ENST00000513584 HNRNPD-004 nonsense_mediated_decay Homo_sapiens 0 1048
ENST00000514325 HNRNPD-006 retained_intron Homo_sapiens 0 542
ENST00000514671 HNRNPD-005 nonsense_mediated_decay Homo_sapiens 0 915
ENST00000515432 HNRNPD-010 protein_coding Homo_sapiens 0 569

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