C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113060 Adamts7-003 ENSMUSG00000032363 10090 + 9:90163226-90200102 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000113060
Transcript ID Testis
ENSMUST00000113060 0.357±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085Y CIL_00085Y_0002 VISTA 9:90013787-90616367
CIL_0008X0 CIL_0008X0_0002 VISTA 9:90119621-90721316

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IDA proteolysis
GO:0008237 IDA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0009986 IDA cell surface
GO:0032331 IEA negative regulation of chondrocyte differentiation
GO:0051603 IEA proteolysis involved in cellular protein catabolic process
GO:0071347 IEA cellular response to interleukin-1
GO:0071356 IEA cellular response to tumor necrosis factor
GO:0071773 IEA cellular response to BMP stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000388820 ADAMTS7-001 protein_coding Homo_sapiens 0 2215
ENST00000561209 ADAMTS7P4-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 850
ENST00000565793 ADAMTS7-004 retained_intron Homo_sapiens 0 1018
ENST00000566116 ADAMTS7P3-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 424
ENST00000566303 ADAMTS7-002 processed_transcript Homo_sapiens 0 769
ENST00000568712 ADAMTS7-003 retained_intron Homo_sapiens 0 1866
ENST00000569934 ADAMTS7-005 retained_intron Homo_sapiens 0 250
ENST00000613213 ADAMTS7P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1201

Loading