C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurexin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401669 NRXN1-003 ENSG00000179915 9606 - 2:49921769-51032176 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartENST00000401669
Transcript ID Bladder Brain Breast Heart
ENST00000401669 0.122±0.00 18.458±0.00 0.345±0.00 0.694±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160844 Nrxn1-001 protein_coding Mus_musculus 0 6822
ENSMUST00000160800 Nrxn1-014 protein_coding Mus_musculus 0 6595
ENSMUST00000161402 Nrxn1-011 protein_coding Mus_musculus 0 6268
ENSMUST00000054059 Nrxn1-020 protein_coding Mus_musculus 0 6211
ENSMUST00000072671 Nrxn1-002 protein_coding Mus_musculus 0 6152
ENSMUST00000161102 Nrxn1-013 retained_intron Mus_musculus 0 5271
ENSMUST00000159778 Nrxn1-009 protein_coding Mus_musculus 0 5228
ENSMUST00000174331 Nrxn1-015 protein_coding Mus_musculus 0 5206
ENSMUST00000161637 Nrxn1-004 processed_transcript Mus_musculus 0 3393
ENSMUST00000172466 Nrxn1-017 protein_coding Mus_musculus 0 1661
ENSDART00000088178 nrxn1a-201 protein_coding Danio_rerio 0 1589
ENSDART00000093094 nrxn1a-001 protein_coding Danio_rerio 0 1589
ENSDART00000111239 nrxn1a-202 protein_coding Danio_rerio 0 1557
ENSMUST00000162002 Nrxn1-007 retained_intron Mus_musculus 0 1280
ENSMUST00000159419 Nrxn1-003 retained_intron Mus_musculus 0 1280
ENSMUST00000160467 Nrxn1-006 retained_intron Mus_musculus 0 1280
ENSMUST00000174337 Nrxn1-016 protein_coding Mus_musculus 0 1000
ENSDART00000149547 nrxn1b-001 protein_coding Danio_rerio 0 922
ENSMUST00000113462 Nrxn2-001 protein_coding Mus_musculus 0 819
ENSMUST00000077182 Nrxn2-201 protein_coding Mus_musculus 0 771
ENSMUST00000137166 Nrxn2-013 protein_coding Mus_musculus 0 732
ENSMUST00000173222 Nrxn1-005 processed_transcript Mus_musculus 0 693
ENSMUST00000176118 Nrxn1-012 protein_coding Mus_musculus 0 676
ENSMUST00000176918 Nrxn1-019 processed_transcript Mus_musculus 0 658
ENSMUST00000177342 Nrxn1-018 protein_coding Mus_musculus 0 654
ENSMUST00000173917 Nrxn1-010 protein_coding Mus_musculus 0 630
ENSMUST00000162227 Nrxn1-008 retained_intron Mus_musculus 0 464
ENSDART00000090934 nrxn3b-202 protein_coding Danio_rerio 0 453
ENSDART00000127050 nrxn3b-203 protein_coding Danio_rerio 0 453
ENSDART00000090646 nrxn3b-201 protein_coding Danio_rerio 0 444
ENSDART00000149694 nrxn3b-001 protein_coding Danio_rerio 0 416
ENSMUST00000095183 Gm10308-201 protein_coding Mus_musculus 0 379
ENSMUST00000113458 Nrxn2-004 protein_coding Mus_musculus 0 302

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