C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurexin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301894 NRXN2-003 ENSG00000110076 9606 - 11:64606174-64643315 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000301894
Transcript ID Adrenal Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000301894 1.346±0.00 18.562±0.00 7.234±0.00 0.090±0.00 1.555±0.00 2.252±0.00 0.231±0.20 12.322±13.36 0.478±0.10 7.337±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005J6 CIL_0005J6_0002 CGP 11:64606174-64745456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007158 TAS neuron cell-cell adhesion
GO:0007268 IEA synaptic transmission
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0050839 TAS cell adhesion molecule binding
GO:0097109 TAS neuroligin family protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113458 Nrxn2-004 protein_coding Mus_musculus 0 3496
ENSMUST00000137166 Nrxn2-013 protein_coding Mus_musculus 0 2841
ENSMUST00000113462 Nrxn2-001 protein_coding Mus_musculus 0 2841
ENSMUST00000113461 Nrxn2-008 protein_coding Mus_musculus 0 1986
ENSMUST00000077182 Nrxn2-201 protein_coding Mus_musculus 0 1232
ENSMUST00000113459 Nrxn2-003 protein_coding Mus_musculus 0 1116
ENSMUST00000154580 Nrxn2-010 processed_transcript Mus_musculus 0 582
ENSMUST00000148391 Nrxn2-009 processed_transcript Mus_musculus 0 455
ENSMUST00000172466 Nrxn1-017 protein_coding Mus_musculus 0 316
ENSMUST00000072671 Nrxn1-002 protein_coding Mus_musculus 0 305
ENSMUST00000161402 Nrxn1-011 protein_coding Mus_musculus 0 305
ENSMUST00000054059 Nrxn1-020 protein_coding Mus_musculus 0 305
ENSMUST00000159778 Nrxn1-009 protein_coding Mus_musculus 0 305
ENSMUST00000160800 Nrxn1-014 protein_coding Mus_musculus 0 305
ENSMUST00000160844 Nrxn1-001 protein_coding Mus_musculus 0 305
ENSMUST00000176918 Nrxn1-019 processed_transcript Mus_musculus 0 231
ENSDART00000111239 nrxn1a-202 protein_coding Danio_rerio 8e-34 150
ENSDART00000088178 nrxn1a-201 protein_coding Danio_rerio 8e-34 150
ENSDART00000056256 nrxn1a-003 protein_coding Danio_rerio 8e-34 150
ENSDART00000088159 nrxn1a-002 protein_coding Danio_rerio 8e-34 150
ENSDART00000093094 nrxn1a-001 protein_coding Danio_rerio 8e-34 150

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