C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: praja ring finger 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113790 Pja1-004 ENSMUSG00000034403 10090 - X:99465738-99470687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000113790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000113790 5.580±1.68 23.174±4.41 4.367±0.89 20.012±1.32 7.060±3.25 9.659±1.14 1.695±0.00 5.233±1.72 6.554±3.14 6.094±1.92 30.094±8.28 5.962±1.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TA CIL_0001TA_0002 CGP X:99136130-99471273
CIL_0002RH CIL_0002RH_0002 CGP X:99465734-99848790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IDA protein ubiquitination
GO:0030163 IDA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361478 PJA1-001 protein_coding Homo_sapiens 0 990
ENST00000374571 PJA1-006 protein_coding Homo_sapiens 0 950
ENST00000374583 PJA1-005 protein_coding Homo_sapiens 0 992
ENST00000374584 PJA1-002 protein_coding Homo_sapiens 0 992

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