C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: praja ring finger 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113797 Pja1-003 ENSMUSG00000034403 10090 - X:99466146-99470672 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113797
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113797 12.813±1.40 8.667±1.00 9.697±0.18 53.283±31.86 8.695±5.46 5.442±0.81 6.306±0.54 12.232±3.47 5.710±1.32 7.450±2.98 2.322±0.56 19.085±14.42 14.381±7.91 10.351±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TA CIL_0001TA_0002 CGP X:99136130-99471273
CIL_0002RH CIL_0002RH_0002 CGP X:99465734-99848790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IDA protein ubiquitination
GO:0030163 IDA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361478 PJA1-001 protein_coding Homo_sapiens 0 952
ENST00000374571 PJA1-006 protein_coding Homo_sapiens 0 950
ENST00000374583 PJA1-005 protein_coding Homo_sapiens 0 952
ENST00000374584 PJA1-002 protein_coding Homo_sapiens 0 952

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