C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and Ig domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114247 Lingo1-002 ENSMUSG00000049556 10090 - 9:56619105-56647660 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114247
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114247 0.424±0.19 0.507±0.00 16.374±11.66 0.805±0.41 0.234±0.11 0.753±0.52 0.153±0.04 0.141±0.13 0.853±0.31 0.195±0.03 0.416±0.21 0.635±0.78 0.297±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SZ CIL_0003SZ_0002 CGP 9:56418644-56685253

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005154 IPI epidermal growth factor receptor binding
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0021954 IDA central nervous system neuron development
GO:0031175 IDA neuron projection development
GO:0043491 IDA protein kinase B signaling
GO:0048715 IMP negative regulation of oligodendrocyte differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355300 LINGO1-001 protein_coding Homo_sapiens 0 2800
ENST00000557798 LINGO1-003 protein_coding Homo_sapiens 0 1301
ENST00000559893 LINGO1-004 protein_coding Homo_sapiens 0 257
ENST00000561030 LINGO1-002 protein_coding Homo_sapiens 0 2793
ENST00000561686 LINGO1-013 protein_coding Homo_sapiens 0 737
ENST00000564472 LINGO1-006 protein_coding Homo_sapiens 9.94922e-44 180
ENST00000566711 LINGO1-014 protein_coding Homo_sapiens 0 329
ENST00000567726 LINGO1-005 protein_coding Homo_sapiens 0 538
ENST00000570216 LINGO1-008 protein_coding Homo_sapiens 8e-22 108

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