C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and Ig domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561030 LINGO1-002 ENSG00000169783 9606 - 15:77613670-77696148 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverMuscleOvaryPlacentaTestisENST00000561030
Transcript ID Adrenal Brain Colon Liver Muscle Ovary Placenta Testis
ENST00000561030 0.388±0.00 4.122±0.58 0.246±0.00 0.073±0.04 0.386±0.00 1.037±0.39 3.020±0.00 1.542±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SZ CIL_0003SZ_0001 CGP 15:77420412-77820900

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0050770 TAS regulation of axonogenesis
GO:0050771 TAS negative regulation of axonogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114247 Lingo1-002 protein_coding Mus_musculus 0 2793
ENSMUST00000114256 Lingo1-003 protein_coding Mus_musculus 0 2789
ENSMUST00000053568 Lingo1-001 protein_coding Mus_musculus 0 2789
ENSDART00000041820 lingo1a-201 protein_coding Danio_rerio 0 815
ENSDART00000149965 lingo1a-001 protein_coding Danio_rerio 0 815

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