C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ngg1 interacting factor 3-like 1 (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114337 Nif3l1-002 ENSMUSG00000026036 10090 + 1:58445267-58481816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000114337
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000114337 6.940±0.53 5.879±2.00 5.018±0.80 5.007±1.23 3.172±0.00 3.757±0.74 3.653±0.32 4.292±0.81 8.097±1.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AY CIL_0002AY_0002 CGP 1:58410189-58445486
CIL_0002AV CIL_0002AV_0002 CGP 1:58430994-58481816
CIL_0002AW CIL_0002AW_0002 CGP 1:58445151-58505109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359683 NIF3L1-001 protein_coding Homo_sapiens 0 1026
ENST00000409020 NIF3L1-004 protein_coding Homo_sapiens 0 1026
ENST00000409129 NIF3L1-009 protein_coding Homo_sapiens 0 604
ENST00000409357 NIF3L1-003 protein_coding Homo_sapiens 0 1026
ENST00000409588 NIF3L1-005 protein_coding Homo_sapiens 0 745
ENST00000416651 NIF3L1-201 protein_coding Homo_sapiens 0 723
ENST00000426253 NIF3L1-007 protein_coding Homo_sapiens 0 725
ENST00000436412 NIF3L1-010 protein_coding Homo_sapiens 0 285
ENST00000454952 NIF3L1-008 protein_coding Homo_sapiens 0 538

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