C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tubby like protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114794 Tulp1-004 ENSMUSG00000037446 10090 - 17:28355817-28365182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryTestisENSMUST00000114794
Transcript ID Liver Ovary Testis
ENSMUST00000114794 0.014±0.00 0.322±0.00 0.093±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002F1 CIL_0002F1_0002 CGP 17:28331671-28365182
CIL_0002F0 CIL_0002F0_0002 CGP 17:28351515-28517524

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007602 IMP phototransduction
GO:0008020 IMP G-protein coupled photoreceptor activity
GO:0009584 IMP detection of visible light
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229771 TULP1-003 protein_coding Homo_sapiens 0 798
ENST00000322263 TULP1-004 protein_coding Homo_sapiens 0 676
ENST00000360228 CACNA1A-001 protein_coding Homo_sapiens 0.00004 57
ENST00000373892 TULP1-002 retained_intron Homo_sapiens 0 499
ENST00000495781 TULP1-007 retained_intron Homo_sapiens 0 209
ENST00000496434 TULP1-006 retained_intron Homo_sapiens 0 368
ENST00000573710 CACNA1A-002 protein_coding Homo_sapiens 0.00004 57
ENST00000614066 TULP1-201 protein_coding Homo_sapiens 0 771
ENST00000614285 CACNA1A-201 protein_coding Homo_sapiens 0.00004 57

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