C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114906 Taf3-004 ENSMUSG00000025782 10090 - 2:9916076-9918834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonENSMUST00000114906
Transcript ID Breast Colon
ENSMUST00000114906 3.441±0.00 2.894±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J5 CIL_0007J5_0002 UCNEbase 2:9433268-9958392
CIL_0000WL CIL_0000WL_0002 CGP 2:9914552-10080510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005669 ISA transcription factor TFIID complex
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344293 TAF3-001 protein_coding Homo_sapiens 0 272

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