C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCR4-NOT transcription complex, subunit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114989 Cnot4-202 ENSMUSG00000038784 10090 - 6:35022066-35133737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000114989
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000114989 0.662±0.14 0.858±0.08 1.286±0.00 3.006±1.81 0.731±0.10 1.099±0.16 1.379±0.09 0.983±0.29 1.716±0.00 0.865±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002H2 CIL_0002H2_0002 CGP 6:35022066-35247590

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000022646 CNOT4 (2 of 2)-001 protein_coding Danio_rerio 3e-32 145
ENST00000315544 CNOT4-201 protein_coding Homo_sapiens 0 2968
ENST00000356162 CNOT4-202 protein_coding Homo_sapiens 0 3360
ENST00000361528 CNOT4-009 protein_coding Homo_sapiens 0 3304
ENST00000414802 CNOT4-004 protein_coding Homo_sapiens 0 1921
ENST00000423368 CNOT4-001 protein_coding Homo_sapiens 0 4390
ENST00000428680 CNOT4-002 protein_coding Homo_sapiens 0 2844
ENST00000451834 CNOT4-003 protein_coding Homo_sapiens 0 2850
ENST00000465721 CNOT4-006 processed_transcript Homo_sapiens 0 457
ENST00000473470 CNOT4-008 processed_transcript Homo_sapiens 0 276
ENST00000491203 CNOT4-007 processed_transcript Homo_sapiens 0 590
ENST00000498534 CNOT4-005 processed_transcript Homo_sapiens 0 510
ENST00000541284 CNOT4-203 protein_coding Homo_sapiens 0 2966

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