C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115246 Csnk1a1-003 ENSMUSG00000024576 10090 + 18:61555318-61582116 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000115246
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000115246 51.758±16.26 47.862±4.46 26.216±3.97 12.967±0.00 6.155±0.82 29.762±8.05 26.393±6.13 86.459±20.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000851 CIL_000851_0002 VISTA 18:61337492-61938739
CIL_0007ZC CIL_0007ZC_0002 VISTA 18:61351102-61954077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IGI cell morphogenesis
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0030529 IDA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261798 CSNK1A1-001 protein_coding Homo_sapiens 0 1748
ENST00000377843 CSNK1A1-201 protein_coding Homo_sapiens 0 1746
ENST00000379800 CSNK1A1L-001 protein_coding Homo_sapiens 0 1330
ENST00000430593 CSNK1A1P1-002 processed_transcript Homo_sapiens 0 401
ENST00000503350 CSNK1A1-006 protein_coding Homo_sapiens 0 739
ENST00000504105 CSNK1A1P3-001 processed_pseudogene Homo_sapiens 0 250
ENST00000504676 CSNK1A1-002 protein_coding Homo_sapiens 0 1367
ENST00000515435 CSNK1A1-004 protein_coding Homo_sapiens 0 841
ENST00000515748 CSNK1A1-005 protein_coding Homo_sapiens 0 396
ENST00000515768 CSNK1A1-003 protein_coding Homo_sapiens 0 839
ENST00000523203 CSNK1A1-007 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000546014 AP000619.6-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000563423 CSNK1A1P1-001 transcribed_processed_pseudogene Homo_sapiens 0 1086
ENST00000606299 CSNK1A1-009 protein_coding Homo_sapiens 0 473
ENST00000606719 CSNK1A1-008 protein_coding Homo_sapiens 0 841
ENST00000606826 CSNK1A1-010 nonsense_mediated_decay Homo_sapiens 0 671

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