C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, alpha 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430593 CSNK1A1P1-002 ENSG00000223518 9606 - 15:36798596-36818459 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000430593
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000430593 0.006±0.00 0.017±0.00 0.045±0.03 0.028±0.00 0.047±0.00 0.123±0.00 0.102±0.03 0.005±0.00 0.059±0.02 0.033±0.03 0.636±0.06 2.734±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HI CIL_0006HI_0001 CGP 15:35217345-36810248
CIL_0007MM CIL_0007MM_0001 UCNEbase 15:35253766-37880700
CIL_0008V8 CIL_0008V8_0001 VISTA 15:36226820-36828494
CIL_00088L CIL_00088L_0001 VISTA 15:36372618-36973897
CIL_0008GX CIL_0008GX_0001 VISTA 15:36373931-36975330
CIL_00084J CIL_00084J_0001 VISTA 15:36391617-36991995
CIL_0006QS CIL_0006QS_0001 CGP 15:36579611-37101299
CIL_00087U CIL_00087U_0001 VISTA 15:36595901-37198492
CIL_0008KD CIL_0008KD_0001 VISTA 15:36599207-37200420
CIL_0008O9 CIL_0008O9_0001 VISTA 15:36624792-37227400
CIL_0008M1 CIL_0008M1_0001 VISTA 15:36648604-37250297
CIL_00096Q CIL_00096Q_0001 VISTA 15:36695888-37296972
CIL_0009D1 CIL_0009D1_0001 VISTA 15:36755403-37357754
CIL_00086F CIL_00086F_0001 VISTA 15:36779528-37380936

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167187 Csnk1a1-009 protein_coding Mus_musculus 0 401
ENSMUST00000170862 Csnk1a1-007 protein_coding Mus_musculus 0 401
ENSMUST00000163205 Csnk1a1-005 protein_coding Mus_musculus 0 401
ENSMUST00000166990 Csnk1a1-004 protein_coding Mus_musculus 0 401
ENSMUST00000115246 Csnk1a1-003 protein_coding Mus_musculus 0 401
ENSMUST00000165721 Csnk1a1-002 protein_coding Mus_musculus 0 401
ENSMUST00000165123 Csnk1a1-001 protein_coding Mus_musculus 0 401

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